rs3746417 chr20:51631720 C>T

Sequence
cctgctcaaaggcctcttttagtc[C/T]agcaatgacagcgctacgatgatc
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells) TTC-1240 (Rhabdoid tumor of the kidney)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HUVEC-C (HUVEC, umbilical vein endothelial cells) 1.00 -0.20 8.1·10-31.00 1.90
TTC-1240 (Rhabdoid tumor of the kidney) 0.69 1.06 0.710.02 1.00
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Motif analysis

No data available

Genetic associations

GRASP fasting blood glucose,  hdl cholesterol,  homa-ir,  infant head circumference,  obesity with early age of onset (age >2),  type 2 diabetes
GTEx eQTL Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Esophagus_Mucosa,  Heart_Left_Ventricle,  Whole_Blood

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