rs374653 chr15:92667500 A>G

Sequence
cccactgcaattcccacagctggc[A/G]tcgtcagcctctccgtgacagtgg
ASB for transcription factors
FOXA1_HUMAN MNT_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 0.97 0.47 6.0·10-31.00 1.82 n/a No Hit
MNT_HUMAN 2.19 -0.70 0.041.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Nerve_Tibial,  Thyroid

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