rs3746624 chr20:56458579 C>T
- Sequence
gacccaggagagggacgtgcgcaa[C/T]gagatcctccgtggcagcagtcac
- ASB in cell types
- T47D (invasive ductal carcinoma)
- ASB for transcription factors
- HIF1A_HUMAN HIF3A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HIF1A_HUMAN | 1.91 | -3.16 | 1.50 | -0.43 | Weak Concordant | |||
| HIF3A_HUMAN | 2.15 | -4.02 | 1.50 | -0.48 | Weak Concordant |
Items per page:
1 – 2 of 2
Motif analysis
