rs3746820 chr20:48691080 G>A

Sequence
ccagccgttggtgacggtatagcc[G/A]ttgctatggtaatccgctggtggg
ASB for transcription factors
RFX1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RFX1_HUMAN 2.64 -2.03 0.021.00 6.00 -4.33 Concordant
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Motif analysis

RFX1_HUMAN Concordant
RFX1_HUMAN pic

Genetic associations

GRASP adiponectin levels,  ldl cholesterol,  rheumatoid arthritis
GTEx eQTL Artery_Coronary,  Artery_Tibial,  Esophagus_Muscularis,  Muscle_Skeletal,  Testis

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