rs3747422 chrX:85003837 C>G
- Sequence
ggggcgtaacggggtggggctgtc[C/G]taagggaagcctagtcgaactgat
- ASB in cell types
- HEK293 (embryonic kidney) HepG2 (hepatoblastoma) CD14+ monocytes GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- TYY1_HUMAN STAT1_HUMAN IKZF2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | n/a | 2.48 | 2.00 | n/a | No Hit | |||
| STAT1_HUMAN | -4.33 | 2.13 | 2.00 | n/a | No Hit | |||
| IKZF2_HUMAN | 2.43 | n/a | 3.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Cortex, Brain_Spinal_cord_cervical_c-1, Brain_Substantia_nigra, Cells_Cultured_fibroblasts, Colon_Transverse, Muscle_Skeletal, Nerve_Tibial, Pituitary, Spleen, Testis, Thyroid, Whole_Blood