rs3747787 chr6:106519903 T>C

Sequence
caatcacccataagcagtttccca[T/C]gcactgatctaaaagtgtcagaaa
ASB in cell types
BEAS-2B (bronchial epithelium) CD14+ monocytes
ASB for transcription factors
GCR_HUMAN STAT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN 0.44 1.38 1.008.5·10-7 1.50 n/a No Hit
STAT1_HUMAN 2.43 n/a 0.021.00 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels,  hdl cholesterol change with statins,  hip bone mineral density (bmd),  lp-pla2 mass,  triglycerides change with statins
GTEx eQTL Cells_EBV-transformed_lymphocytes,  Colon_Transverse,  Heart_Atrial_Appendage,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Testis,  Thyroid

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