rs3748079 chr6:33620370 C>T
- Sequence
tcggatggcggtggcaatgggcac[C/T]ctatcttaggcgttcaaataaagg
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.21 | -1.36 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP alzheimers disease (apoe3 homozygotes), birth weight, college completion, coronary artery disease (cad), endometriosis, graves disease, partial epilepsy, rheumatoid arthritis, systemic lupus erythematosus (sle), transmission distortion, years of education
GTEx eQTL Adrenal_Gland, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood