rs3748144 chr8:8797513 C>T

Sequence
cccctgtaggaggagagagaaaaa[C/T]gtgttagggagatgtgcactaaaa
ASB in cell types
germinal center B-cells

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
germinal center B-cells -0.26 2.14 1.008.2·10-3 3.00
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  body mass index (bmi),  hdl cholesterol,  infant head circumference,  schizophrenia,  simpson-angus scale,  triglycerides,  urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Visceral_Omentum,  Artery_Tibial,  Brain_Anterior_cingulate_cortex_BA24,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Cortex,  Brain_Frontal_Cortex_BA9,  Brain_Nucleus_accumbens_basal_ganglia,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Testis,  Thyroid

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