rs3748289 chr12:14776733 C>G

Sequence
aaaaatgcctcattgttagaacta[C/G]tactcacagttaccacttggggtc
ASB for transcription factors
CTCF_HUMAN ANDR_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.31 0.91 1.000.02 1.32 n/a No Hit
ANDR_HUMAN 2.73 n/a 0.021.00 2.00 4.27 Discordant
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Motif analysis

ANDR_HUMAN Discordant
ANDR_HUMAN pic

Genetic associations

GRASP 2 hour glucose,  cystatin c in serum,  parkinsons disease
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Esophagus_Muscularis,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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