rs3749864 chr6:45422996 G>C

Sequence
cgccccccgcccccggccgggagc[G/C]gcggaacctgcccgccggtgtctt
ASB in cell types
HCC1806(Squamous cell breast carcinoma, acantholytic variant) 22RV1 (prostate carcinoma)
ASB for transcription factors
BRD2_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD2_HUMAN 0.37 3.06 1.001.6·10-4 1.67 n/a n/a
ANDR_HUMAN 2.04 n/a 0.031.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Cortex,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg

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