rs3750243 chr8:38030499 C>G
- Sequence
aaggggcgtcctggggcggggcgg[C/G]acggggcgaggcggagcgaggctg
- ASB in cell types
- HEK293 (embryonic kidney) HepG2 (hepatoblastoma) GM12878 (female B-cells lymphoblastoid cell line) GM01310 ( Transformed lymphovlasoid cell line )
- ASB for transcription factors
- SP3_HUMAN GABP1_HUMAN ELF1_HUMAN AHR_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP3_HUMAN | 1.76 | n/a | 2.00 | 2.97 | Discordant | |||
| GABP1_HUMAN | 2.08 | -3.21 | 1.50 | n/a | n/a | |||
| ELF1_HUMAN | 1.82 | -0.37 | 1.38 | n/a | No Hit | |||
| AHR_HUMAN | 1.96 | -0.55 | 1.00 | n/a | No Hit | |||
| ZN341_HUMAN | 2.26 | n/a | 2.00 | 1.47 | Weak Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Left_Ventricle