rs3750620 chr10:110919363 A>T
- Sequence
agtgggcgggagacggcgtagagg[A/T]actgaggaaaggacaagggcggag
- ASB in cell types
- adult erythroblasts HepG2 (hepatoblastoma)
- ASB for transcription factors
- HCFC1_HUMAN SPI1_HUMAN RBBP5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HCFC1_HUMAN | 1.28 | 0.24 | 1.75 | n/a | n/a | |||
| SPI1_HUMAN | 1.31 | -0.90 | 1.67 | -4.40 | Concordant | |||
| RBBP5_HUMAN | 1.50 | n/a | 2.50 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Cells_Cultured_fibroblasts, Thyroid