rs3750710 chr10:100267608 T>C

Sequence
tctgtgccatctgtccgaatagta[T/C]gggttgcgactgccacctaaaatt
ASB in cell types
HCT-116 (colon carcinoma) A549 (lung carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HCT-116 (colon carcinoma) 0.93 -0.25 2.6·10-31.00 1.77
A549 (lung carcinoma) 0.10 0.88 1.000.02 2.00
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy),  birth weight,  infant head circumference
GTEx eQTL Adipose_Subcutaneous,  Colon_Transverse,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid,  Whole_Blood

Download