rs3752260 chr20:46406817 A>T

Sequence
ggcctcttaaagaaacaggacgcc[A/T]ttcccctgcgggctacagggtctg
ASB in cell types
HEK293 (embryonic kidney) MDM(monocyte derived macrophages)
ASB for transcription factors
TF65_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN 3.15 n/a 3.6·10-31.00 3.00 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP adiponectin levels,  mitral annular calcium,  refractive error,  rheumatoid arthritis
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Tibial,  Brain_Cortex,  Esophagus_Muscularis

Download