rs3752576 chr6:122471928 C>A
- Sequence
cgcgcagcgctgagactgcgcatg[C/A]gcgtcactagacgacacggctgtc
- ASB in cell types
- 22RV1 (prostate carcinoma) CD14+ monocytes macrophages form periferal blood
- ASB for transcription factors
- ANDR_HUMAN SPI1_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.62 | -5.02 | 2.00 | n/a | No Hit | |||
| SPI1_HUMAN | 1.55 | 0.27 | 1.90 | n/a | No Hit | |||
| STAT1_HUMAN | 2.12 | -0.20 | 1.50 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood