rs3752847 chr6:117602516 C>A
- Sequence
cggaagactcagtcagtcccacct[C/A]ccagcctgcccccgctgcgcatgc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) HepG2 (hepatoblastoma) breast tumor Th1-cells
- ASB for transcription factors
- TYY1_HUMAN ESR1_HUMAN FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | 0.32 | 2.03 | 3.50 | n/a | No Hit | |||
| ESR1_HUMAN | 3.17 | n/a | 2.00 | n/a | No Hit | |||
| FOXK2_HUMAN | 2.56 | 0.55 | 1.75 | n/a | No Hit |
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