rs3753270 chr1:23691734 C>T
- Sequence
aaatgcgcctctcttcctcgtctt[C/T]atctctgtggttagcctgggaaaa
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line) breast tumor 22RV1 (prostate carcinoma)
- ASB for transcription factors
- FOXK2_HUMAN HCFC1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 1.75 | -0.37 | 1.12 | n/a | No Hit | |||
| HCFC1_HUMAN | 1.66 | 0.22 | 1.83 | n/a | n/a | |||
| ANDR_HUMAN | 2.74 | -5.07 | 2.00 | n/a | No Hit |
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