rs3753584 chr1:11804529 T>C
- Sequence
gacaggccaacagagggcataggg[T/C]catctggcagtctggttaagaaaa
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 3.05 | -5.12 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
EMBL-EBI diastolic blood pressure x alcohol consumption (light vs heavy) interaction (2df test), mean arterial pressure x alcohol consumption (light vs heavy) interaction (2df test), medication use (calcium channel blockers), midregional pro atrial natriuretic peptide levels, systolic blood pressure x alcohol consumption (light vs heavy) interaction (2df test)
GRASP comorbid depressive syndrome and alcohol dependence, diabetic retinopathy in type 2 diabetes mellitus
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood