rs3754080 chr1:36150736 T>C

Sequence
agtgacccctcactctccatcctg[T/C]gtaatgccacaggggagggagcca
ASB in cell types
K562 (myelogenous leukemia) breast tumor

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.84 0.76 1.3·10-71.4·10-3 1.03
breast tumor n/a 2.69 1.000.03 2.00
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Motif analysis

No data available

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence
GTEx eQTL Artery_Tibial,  Esophagus_Mucosa,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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