rs3754174 chr1:40821218 T>C

Sequence
catgccaagagacagctagtattg[T/C]ggtgcccataattaatgagacagc
ASB in cell types
K562 (myelogenous leukemia) adult erythroblasts brain prefrontal cortex region tissues
ASB for transcription factors
RBBP5_HUMAN OLIG2_HUMAN ARI1B_HUMAN ARNT_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RBBP5_HUMAN 2.63 n/a 6.3·10-31.00 4.00 n/a n/a
OLIG2_HUMAN 0.89 2.60 1.000.01 1.00 n/a No Hit
ARI1B_HUMAN 0.63 -0.63 0.011.00 1.00 n/a n/a
ARNT_HUMAN 2.07 0.32 0.011.00 1.00 n/a No Hit
KDM1A_HUMAN 1.36 -1.18 0.021.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  serum creatinine
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Adrenal_Gland,  Muscle_Skeletal,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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