rs3754496 chr1:22052387 C>A

Sequence
tgagatcgcgcgctgcactccagt[C/A]tgggcaacagatcaagactgtctc
ASB in cell types
HEK293 (embryonic kidney) 22RV1 (prostate carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney) 0.16 0.82 1.004.2·10-10 2.02
22RV1 (prostate carcinoma) 2.69 -4.93 8.0·10-31.00 2.00
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Motif analysis

No data available

Genetic associations

GRASP endometriosis
GTEx eQTL Colon_Sigmoid,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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