rs3754701 chr2:237858561 A>T
- Sequence
tgttccctttcctaggagaaaacg[A/T]tggtcactcagcaatgctgtgcgc
- ASB in cell types
- HEK293 (embryonic kidney) GM12878 (female B-cells lymphoblastoid cell line) erythroid cells GM18526 (B – cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- ZN600_HUMAN STAG1_HUMAN PRD10_HUMAN ZN189_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN600_HUMAN | -4.24 | 3.92 | 1.00 | n/a | n/a | |||
| STAG1_HUMAN | 0.16 | 1.24 | 1.14 | n/a | n/a | |||
| PRD10_HUMAN | -3.71 | 2.42 | 1.33 | n/a | n/a | |||
| ZN189_HUMAN | -2.29 | 2.64 | 1.00 | n/a | No Hit | |||
| PRDM1_HUMAN | n/a | 2.67 | 1.00 | n/a | No Hit |
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