rs3754725 chr2:237703743 T>G
- Sequence
caccaggtgctttgcctgtttccc[T/G]ggagactgggcacccaaaccacat
- ASB in cell types
- OCI-LY7 (diffuse large B-cell lymphoma) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- FOXP1_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXP1_HUMAN | 2.63 | -2.67 | 1.00 | n/a | No Hit | |||
| GCR_HUMAN | 0.25 | 1.31 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Thyroid, Whole_Blood