rs3755992 chr4:139657888 G>A

Sequence
gtttcctttctttttgtgcaggac[G/A]tgacttggcctccgatctagacac
ASB in cell types
HepG2 (hepatoblastoma) CAR-T cells HUVEC-C (HUVEC, umbilical vein endothelial cells)
ASB for transcription factors
IRF4_HUMAN SP130_HUMAN TF65_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IRF4_HUMAN 2.10 -1.31 6.0·10-31.00 1.00 n/a No Hit
SP130_HUMAN 2.74 -2.62 7.3·10-31.00 1.00 n/a n/a
TF65_HUMAN 1.68 n/a 0.021.00 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  eye color,  ldl cholesterol,  total cholesterol,  triglycerides change with statins
GTEx eQTL Esophagus_Mucosa,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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