rs3755996 chr4:139656766 C>A

Sequence
tctcacccctcctctatcccctcg[C/A]agtttgccacagggatgccaaacg
ASB in cell types
pancreas GM19193 (female B-cells Lymphoblastoid Cell Lines) adrenal gland Peyer's patch
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.31 1.97 1.001.1·10-54 1.41 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP asthma,  hypertension (early onset hypertension),  ldl cholesterol,  total cholesterol change with statins,  triglycerides change with statins
GTEx eQTL Whole_Blood

Download