rs3756063 chr4:89836243 G>C
- Sequence
tgagcaggcgccgctcacactcgc[G/C]ggccgtctccaaccccgcgccagc
- ASB in cell types
- CD34+ hematopoietic stem cells-derived proerythroblasts keratinocytes K562 (myelogenous leukemia)
- ASB for transcription factors
- SNAI2_HUMAN TAL1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | 2.50 | -4.41 | 1.50 | n/a | No Hit | |||
| TAL1_HUMAN | 1.92 | -1.41 | 1.75 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Spinal_cord_cervical_c-1, Breast_Mammary_Tissue, Esophagus_Mucosa, Heart_Atrial_Appendage, Heart_Left_Ventricle, Nerve_Tibial, Pituitary, Prostate, Spleen, Whole_Blood