rs3756260 chr4:105708873 G>C
- Sequence
ggtggctgtcgtttttctcctggc[G/C]tctgtggaggcgagtggtctgcgg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CD14+ monocytes BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- STAT1_HUMAN GCR_HUMAN SP130_HUMAN FOXK2_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.36 | -0.16 | 2.00 | n/a | No Hit | |||
| GCR_HUMAN | 0.18 | 0.98 | 1.00 | n/a | No Hit | |||
| SP130_HUMAN | -1.91 | 2.26 | 1.00 | n/a | n/a | |||
| FOXK2_HUMAN | 2.51 | 0.41 | 1.25 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Pancreas, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood