rs3756354 chr5:100903829 G>C

Sequence
acacacatgaacctgttagccgat[G/C]ggcccactctgcatgggtggtgga
ASB in cell types
CD14+ monocytes GM12878 (female B-cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
CD14+ monocytes 2.21 -4.44 0.011.00 2.00
GM12878 (female B-cells lymphoblastoid cell line) 0.70 0.90 0.370.03 1.06
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Motif analysis

No data available

Genetic associations

GRASP rheumatoid arthritis
GTEx eQTL Lung,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg

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