rs3756400 chr5:69369909 T>C

Sequence
ccctggtcgcctccgctcttcgcc[T/C]aaaaggggatgcagctccgggaaa
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN n/a 3.51 1.001.2·10-3 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  hdl cholesterol,  hdl cholesterol change with statins
GTEx eQTL Brain_Hypothalamus,  Esophagus_Mucosa,  Lung,  Minor_Salivary_Gland,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Testis,  Thyroid

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