rs3756456 chr5:39425130 G>C
- Sequence
ccctgagctccgcgagccccacca[G/C]ctgggggcgatcgcagggacccag
- ASB in cell types
- neural cell Jurkat (T-cells)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.23 | 1.31 | 1.26 | 1.00 | Weak Concordant |
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Motif analysis
