rs3756819 chr6:24665112 A>C

Sequence
cagaaatacagccatgtttaagga[A/C]gggcagttaagggctttctctcaa
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 2.81 n/a 1.6·10-31.00 1.50 -2.84 Concordant
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Motif analysis

SPI1_HUMAN Concordant
SPI1_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration,  refractive error
GTEx eQTL Adipose_Subcutaneous,  Adrenal_Gland,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Esophagus_Muscularis,  Muscle_Skeletal,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid

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