rs3757649 chr7:111742216 G>A

Sequence
gctatgggccgagcactttactac[G/A]catttcgcttgcattattgctaat
ASB in cell types
K562 (myelogenous leukemia) GM12891 (male B- cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 1.84 -1.38 0.021.00 1.50
GM12891 (male B- cells lymphoblastoid cell line) -0.23 1.35 1.000.04 1.00
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  homa-b,  infant head circumference,  refractive error,  schizophrenia
GTEx eQTL Cells_Cultured_fibroblasts

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