rs3758031 chr8:98046165 A>C
- Sequence
cgactgaaggtgaggtgggagggt[A/C]gatgagaagaggctgcggcggctg
- ASB in cell types
- K562 (myelogenous leukemia) LNCaP C4-2B (prostate carcinoma) hTERT-HME1(Telomerase immortalized cell line)
- ASB for transcription factors
- BRCA2_HUMAN ZFX_HUMAN ZEB2_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRCA2_HUMAN | 2.24 | -0.45 | 1.00 | n/a | n/a | |||
| ZFX_HUMAN | 1.74 | -1.03 | 1.00 | n/a | No Hit | |||
| ZEB2_HUMAN | 2.25 | -1.01 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Esophagus_Mucosa, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Thyroid