rs3758102 chr8:38459331 C>T
- Sequence
gggcccctcgcaagtgagtcagtg[C/T]tggctggcagaaaagcccctggat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MCF10A (breast epithelial cells)
- ASB for transcription factors
- SRF_HUMAN TEAD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRF_HUMAN | -2.41 | 2.65 | 1.00 | n/a | No Hit | |||
| TEAD4_HUMAN | -2.75 | 2.65 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adrenal_Gland, Artery_Aorta, Brain_Anterior_cingulate_cortex_BA24, Brain_Cerebellum, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Nerve_Tibial, Pancreas, Pituitary, Prostate, Spleen, Stomach, Thyroid, Whole_Blood