rs3758269 chr9:33403642 G>A

Sequence
ttctgcagatctttctgcaggggt[G/A]aggcagggagaggaaggggtcggc
ASB in cell types
foreskin keratinocyte GM12891 (male B- cells lymphoblastoid cell line) GM12890 (Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.18 0.19 1.1·10-61.00 1.39 n/a No Hit
STAG1_HUMAN 0.86 -0.69 5.9·10-51.00 1.17 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Visceral_Omentum,  Heart_Atrial_Appendage,  Thyroid

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