rs3758365 chr10:28676844 C>G

Sequence
aattttcgttaagtgtctctagcc[C/G]gctactcgtcccgcgtacccggga
ASB in cell types
HS-SY-2(Monophasic synovial sarcoma) LNCaP C4-2B (prostate carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HS-SY-2(Monophasic synovial sarcoma) 1.02 -0.35 0.011.00 2.86
LNCaP C4-2B (prostate carcinoma) 0.26 2.49 1.000.02 1.00
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  triglycerides
GTEx eQTL Artery_Tibial,  Skin_Sun_Exposed_Lower_leg

Download