rs3758423 chr10:13302169 G>A
- Sequence
ggaggcccgcagccagcatcacca[G/A]ccccttcctgtttgcacaggcagg
- ASB in cell types
- K562 (myelogenous leukemia) neural cell primary B-CLL cells MDA-MB-231-1833 (breast cancer cells, bone-tropic metastatic line)
- ASB for transcription factors
- RFOX2_HUMAN MNT_HUMAN ZEB2_HUMAN ILF3_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFOX2_HUMAN | -1.86 | 2.66 | 2.00 | n/a | n/a | |||
| MNT_HUMAN | -0.76 | 1.98 | 2.00 | n/a | No Hit | |||
| ZEB2_HUMAN | n/a | 2.32 | 2.00 | n/a | No Hit | |||
| ILF3_HUMAN | -1.98 | 2.78 | 2.00 | n/a | n/a | |||
| NCOR1_HUMAN | -1.47 | 2.19 | 1.75 | n/a | n/a |
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