rs3758833 chr11:88338488 G>A
- Sequence
atgatattgctcaaccccttttat[G/A]ttacagaggaaaagcaagaggccc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) macrophages form periferal blood CD14+ monocytes macrophages
- ASB for transcription factors
- STAT1_HUMAN SPI1_HUMAN IKZF2_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.24 | -0.18 | 1.75 | n/a | No Hit | |||
| SPI1_HUMAN | 1.03 | 0.50 | 1.63 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.66 | -1.29 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 1.58 | -0.16 | 1.17 | n/a | n/a | |||
| TIF1B_HUMAN | 2.34 | n/a | 2.00 | n/a | n/a |
Items per page:
1 – 5 of 5