rs3759316 chr12:106976432 A>C

Sequence
tttcattatacttaagccatgtac[A/C]aatagtgcacagatgttgtcagtc
ASB in cell types
HepG2 (hepatoblastoma) K562 (myelogenous leukemia)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HepG2 (hepatoblastoma) 0.83 0.33 1.0·10-31.00 1.20
K562 (myelogenous leukemia) 0.67 0.07 4.1·10-31.00 2.02
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels,  body mass index (bmi),  height
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Adrenal_Gland,  Artery_Tibial,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Mucosa,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Testis,  Thyroid

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