rs3759343 chr12:6723938 T>C
- Sequence
cgaccaatcgaagagtagaatgcc[T/C]gcgtccctcactggagcttcagcg
- ASB in cell types
- breast tumor 22RV1 (prostate carcinoma) BEAS-2B (bronchial epithelium) transverse colon
- ASB for transcription factors
- GABPA_HUMAN ANDR_HUMAN GCR_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GABPA_HUMAN | 1.25 | -1.13 | 1.17 | n/a | No Hit | |||
| ANDR_HUMAN | 2.44 | -0.21 | 2.00 | n/a | No Hit | |||
| GCR_HUMAN | 0.11 | 1.07 | 1.00 | n/a | No Hit | |||
| ESR1_HUMAN | 1.95 | -0.13 | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.40 | 1.14 | 1.01 | n/a | No Hit |
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