rs3759406 chr12:51047968 C>T
- Sequence
aactgacatctgctacctaacagt[C/T]gaggctccgacgccccgagtccag
- ASB in cell types
- K562 (myelogenous leukemia) neural cell THP-1 (acute monocytic leukemia) CD34+ stem cells-derived erythroblasts
- ASB for transcription factors
- CTCF_HUMAN MEIS2_HUMAN NCOA1_HUMAN CTBP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.70 | 0.83 | 1.22 | n/a | No Hit | |||
| MEIS2_HUMAN | -5.01 | 2.92 | 2.00 | n/a | No Hit | |||
| NCOA1_HUMAN | -0.52 | 2.41 | 2.00 | n/a | n/a | |||
| CTBP1_HUMAN | n/a | 1.70 | 2.00 | n/a | n/a |
Items per page:
1 – 4 of 4