rs3759832 chr15:59691457 C>T
- Sequence
aaatcatatatagttatgtgattt[C/T]ttttttttaagatcttcagttcct
- ASB in cell types
- KMS-11 (Plasma cell myeloma) LUHMES (lund human mesencephalic cells) glioblastoma cells hASC (preadipocytes)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.94 | 1.03 | 1.29 | n/a | No Hit | |||
| RAD21_HUMAN | 1.55 | -0.15 | 1.56 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Esophagus_Mucosa, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Testis, Thyroid, Whole_Blood