rs376047 chr19:11265999 C>T
- Sequence
actttggcctcctctgctctactg[C/T]gtggagaacacgttgcggacatga
- ASB in cell types
- MDA-MB-231-1833 (breast cancer cells, bone-tropic metastatic line) MDA-MB-231p27CK-DD (breast cancer cells, phosphimimetic p27 cell line)
- ASB for transcription factors
- JUN_HUMAN CDN1B_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | -0.07 | 1.72 | 2.33 | n/a | No Hit | |||
| CDN1B_HUMAN | -0.55 | 2.06 | 2.25 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Hippocampus, Brain_Nucleus_accumbens_basal_ganglia, Lung, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Whole_Blood