rs3760511 chr17:37746322 G>T
- Sequence
gggcggcggaagcgcgcccaaacc[G/T]gcaagctaggacctgacctgtaga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | 2.48 | -2.48 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP comorbid depressive syndrome and alcohol dependence, diastolic blood pressure (dbp), endometrial cancer, height, ldl cholesterol, premature ovarian failure, prostate cancer, total cholesterol, type 2 diabetes