rs3760663 chr19:49157855 G>A
- Sequence
ccctgggctgcaggaggttgcggc[G/A]gccgcggcagcatggtggtgccgg
- ASB in cell types
- 22RV1 (prostate carcinoma) foreskin keratinocyte
- ASB for transcription factors
- GRHL2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GRHL2_HUMAN | 0.12 | 0.85 | 1.96 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, chronic kidney disease, ldl cholesterol change with statins, obesity with early age of onset (age >2), serum creatinine
GTEx eQTL Artery_Aorta, Brain_Cerebellum, Colon_Transverse, Heart_Left_Ventricle, Lung, Pituitary, Spleen, Testis, Whole_Blood