rs3762008 chr6:5003747 C>T
- Sequence
cagttaagagactacaactcccag[C/T]aagccgggcgagggccccgcccct
- ASB in cell types
- breast tumor 22RV1 (prostate carcinoma) CD14+ monocytes
- ASB for transcription factors
- ANDR_HUMAN ESR1_HUMAN RFX1_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 3.11 | n/a | 2.00 | n/a | No Hit | |||
| ESR1_HUMAN | 1.27 | 0.35 | 1.31 | n/a | No Hit | |||
| RFX1_HUMAN | -0.65 | 2.70 | 1.17 | n/a | No Hit | |||
| STAG1_HUMAN | -0.17 | 1.43 | 1.07 | n/a | n/a | |||
| CDN1B_HUMAN | 1.11 | 0.00 | 1.00 | n/a | n/a |
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