rs3762111 chr12:79935464 T>G

Sequence
tctacagggcagatctgcctcccg[T/G]gctgtctcagctacgccgagtcgt
ASB in cell types
breast tumor spleen primary B-CLL cells CD14+ monocytes
ASB for transcription factors
ESR1_HUMAN CTCF_HUMAN BRD4_HUMAN STAT1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN n/a 3.56 1.002.0·10-4 2.00 n/a No Hit
CTCF_HUMAN 0.78 2.01 1.008.1·10-3 1.24 n/a No Hit
BRD4_HUMAN 1.10 2.06 0.490.03 1.90 n/a n/a
STAT1_HUMAN 0.77 2.14 0.830.03 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease,  cystatin c in serum,  fasting insulin,  homa-b,  serum creatinine
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Artery_Tibial,  Brain_Hippocampus,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Muscularis,  Testis

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