rs3762313 chr1:67431276 G>T

Sequence
acatgcgctcaatacatatcattt[G/T]agaacatttcgagtgcatgtgtgc
ASB in cell types
K562 (myelogenous leukemia) HEK293 (embryonic kidney) GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
SRF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SRF_HUMAN 2.24 -2.06 0.031.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  ldl cholesterol
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

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