rs3762536 chr2:9949593 G>A

Sequence
aatgatttaaacaggaaactagtg[G/A]taagaacaaacaacaggctgcatg
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
FOXA2_HUMAN ETV5_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA2_HUMAN n/a 3.69 1.001.1·10-4 2.00 n/a No Hit
ETV5_HUMAN n/a 3.12 1.009.0·10-3 2.00 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP bipolar disorder,  ldl cholesterol,  major depressive disorder,  waist hip ratio
GTEx eQTL Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Cells_Cultured_fibroblasts,  Heart_Atrial_Appendage,  Lung,  Testis,  Thyroid

Download