rs3762555 chr2:170815885 C>G
- Sequence
agacccgggagcgcagggcctctc[C/G]gtctctgggctcttggcgccctct
- ASB in cell types
- K562 (myelogenous leukemia) WA09 (embryonic stem cells) HEK293 (embryonic kidney) foreskin keratinocyte
- ASB for transcription factors
- ZN449_HUMAN MNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN449_HUMAN | -1.65 | 2.02 | 1.00 | n/a | No Hit | |||
| MNT_HUMAN | 0.55 | 1.76 | 1.00 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Amygdala, Brain_Anterior_cingulate_cortex_BA24, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Nerve_Tibial, Pancreas, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Thyroid